Now showing items 1-10 of 82
On the Centrality of HPC for taking NGS to the next frontier: Clinical application at scale
Next Generation Sequencing (NGS), the basis for volume sequencing enablement, has been around for several years. The volume of sequencers deployed per year remains on an exponential growth path. Nevertheless, the vision ...
Exploring Adverse Drug Effect Data with Apache Spark, Hadoop, and Docker
Adverse drug reactions (ADRs), a subset of the broader adverse events (AEs), have been shown in several studies to have a considerable burden on healthcare costs and patient outcomes. ADRs account for a significant increase ...
Introduction to MPI
"Introduction to MPI" (Henry Neeman) LCI Workshop, Mon May 18 2015
Introduction to High Performance Computing
"Introduction to HPC" (Henry Neeman) presented at the Linux Cluster Institute (LCI) Workshop, Mon May 18 2015
Advanced Cyberinfrastructure Research & Education Facilitators Virtual Residency 2016 overview
Advanced Cyberinfrastructure Research & Education Facilitators Advanced Cyberinfrastructure Research & Education Facilitator (term coined by Miron Livny) National Science Foundation’s Campus Cyberinfrastructure Programs
Introduction to research facilitation
N-Body Simulation and Collective Communication (SC '08 Education Program's Workshop on Parallel & Cluster Computing)
An N-body problem is a problem involving N “bodies” – that is, particles (e.g., stars, atoms) – each of which applies a force to all of the others. For example, if you have N stars, then each of the N stars exerts a ...
Monte Carlo Simulation (SC '08 Education Program's Workshop on Parallel & Cluster Computing)
An application is known as embarrassingly parallel if its parallel implementation: can straightforwardly be broken up into roughly equal amounts of work per processor, AND has minimal parallel overhead (e.g., communication ...
Parallel & cluster computing : linear algebra