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On the Centrality of HPC for taking NGS to the next frontier: Clinical application at scale
(2015-09-23)
Next Generation Sequencing (NGS), the basis for volume sequencing enablement, has been around for several years. The volume of sequencers deployed per year remains on an exponential growth path. Nevertheless, the vision ...
High Throughput Computing (SC '08 Education Program's Workshop on Parallel & Cluster Computing)
(2008-08-10)
OUTLINE:
-----What is High Throughput Computing?
-----Tightly Coupled vs Loosely Coupled
-----What is Opportunistic Computing?
-----Condor
-----Grid Computing
-----OU’s NSF CI-TEAM Project (a word from our sponsors
Developing a Hands-On Course Around Building and Testing High Performance Computing Clusters
(2015-06-01)
We describe a successful approach to designing and implementing a High Performance Computing (HPC) class focused on creating competency in building, configuring, programming, troubleshooting, and benchmarking HPC clusters. ...
Stupid Compiler Tricks (SC '08 Education Program's Workshop on Parallel & Cluster Computing)
(2008-08-10)
Stupid Compiler Tricks
--Dependency Analysis
--What is Dependency Analysis?
--Control Dependencies
--Data Dependencies
--Tricks the Compiler Plays
--Tricks You Play With the Compiler
--Profiling
Shared Memory Parallelism (SC '08 Education Program's Workshop on Parallel & Cluster Computing)
(2008-08-10)
OUTLINE:
----Parallelism
----Shared Memory Parallelism
----OpenMP