Functional Analysis of Duplicated NF-YB Genes in Photoperiod-Dependent Flowering
dc.contributor.advisor | Holt, Ben F. | |
dc.contributor.author | Carpenter, Emily Mills | |
dc.contributor.committeeMember | Russell, Scott | |
dc.contributor.committeeMember | Masly, John P. | |
dc.date.accessioned | 2018-05-11T14:30:24Z | |
dc.date.available | 2018-05-11T14:30:24Z | |
dc.date.issued | 2018-05 | |
dc.date.manuscript | 2018-05 | |
dc.description.abstract | The heterotrimeric transcription factor NUCLEAR FACTOR Y (NF-Y) regulates photoperiod-dependent flowering and is composed of NF-YA, NF-YB, and NF-YC subunits. In higher plants, such as Arabidopsis thaliana, whole genome duplication (WGD) leads to an evolutionary expansion of NF-Y subunits. NF-YB and NF-YC proteins have a highly conserved histone-like fold domain (HFD) and flanking variable amino (N) and carboxy (C) terminals. NF-YB proteins have known roles in the control of floral induction, with the nf-yb2 nf-yb3 mutant displaying a late-flowering phenotype. To better understand their ability to regulate photoperiod-dependent flowering from a structure/function perspective, 10 NF-YB HFD were overexpressed in nf-yb2 nf-yb3. The HFD alone could rescue the late-flowering phenotype of nf-yb2 nf-yb3, except NF-YB4. While full-length NF-YB1 cannot rescue late flowering, while Full-length NF-YB2 rescues the nf-yb2 nf-yb3 phenotype, similar to wild-type. Chimeric experiments between NF-YB1 and NF-YB2 show that NF-YB2 N and C termini decrease the success of NF-YB1 HFD to rescue nf-yb2 nf-yb3. Meaning the N and C termini have evolved to modulate the functionality of the NF-YB HFD, and cannot enhance NF-YB1 HFD ability to promote flowering. My structure and function analysis of the NF-YB family displays a unique case of subfunctionalization called Escape from Adaptive Conflict (EAC), the ability of a duplicated gene to obtain a novel function while still maintaining its ancestral role. The ancestral role is designated in the HFD where most of the action for floral initiation resides, however, the variable N and C termini can only modulate the primary functionality of their native NF-YB HFD. | en_US |
dc.identifier.uri | https://hdl.handle.net/11244/299872 | |
dc.language | en | en_US |
dc.subject | Biology, Molecular. | en_US |
dc.subject | Evolution | en_US |
dc.subject | Nuclear Factor Y | en_US |
dc.subject | Histone-like fold domain | en_US |
dc.thesis.degree | Master of Science | en_US |
dc.title | Functional Analysis of Duplicated NF-YB Genes in Photoperiod-Dependent Flowering | en_US |
ou.group | College of Arts and Sciences::Department of Microbiology and Plant Biology | en_US |
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