Browsing OSU - Faculty and Staff Publications by Author "Kaundal, Rakesh"
Now showing items 1-4 of 4
-
Identification and characterization of plastid-type proteins from sequence-attributed features using machine learning
Kaundal, Rakesh; Sahu, Sitanshu S.; Verma, Ruchi; Weirick, Tyler (BioMed Central, 2013-10-09)Background: Plastids are an important component of plant cells, being the site of manufacture and storage of chemical compounds used by the cell, and contain pigments such as those used in photosynthesis, starch ... -
LacSubPred: Predicting subtypes of Laccases, an important lignin metabolism-related enzyme class, using in silico approaches
Weirick, Tyler; Sahu, Sitanshu S.; Mahalingam, Ramamurthy; Kaundal, Rakesh (BioMed Central, 2014-10-21)Background: Laccases (E.C. 1.10.3.2) are multi-copper oxidases that have gained importance in many industries such as biofuels, pulp production, textile dye bleaching, bioremediation, and food production. Their usefulness ... -
PHDcleav: A SVM based method for predicting human Dicer cleavage sites using sequence and secondary structure of miRNA precursors
Ahmed, Firoz; Kaundal, Rakesh; Raghava, Gajendra P. S. (BioMed Central, 2013-10-09)Background: Dicer, an RNase III enzyme, plays a vital role in the processing of pre-miRNAs for generating the miRNAs. The structural and sequence features on pre-miRNA which can facilitate position and efficiency of cleavage ... -
Predicting genome-scale Arabidopsis-Pseudomonas syringae interactome using domain and interolog-based approaches
Sahu, Sitanshu S.; Weirick, Tyler; Kaundal, Rakesh (BioMed Central, 2014-10-21)Background: Every year pathogenic organisms cause billions of dollars' worth damage to crops and livestock. In agriculture, study of plant-microbe interactions is demanding a special attention to develop management strategies ...