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Sorghum Genome Sequencing by Methylation Filtration

dc.contributor.authorJoseph A Bedellen_US
dc.contributor.authorMuhammad A Budimanen_US
dc.contributor.authorAndrew Nunbergen_US
dc.contributor.authorRobert W Citeken_US
dc.contributor.authorDan Robbinsen_US
dc.contributor.authorJoshua Jonesen_US
dc.contributor.authorElizabeth Flicken_US
dc.contributor.authorTheresa Rohlfingen_US
dc.contributor.authorJason Friesen_US
dc.contributor.authorKourtney Bradforden_US
dc.contributor.authorJennifer McMenamyen_US
dc.contributor.authorMichael Smithen_US
dc.contributor.authorHeather Holemanen_US
dc.contributor.authorBruce A Roeen_US
dc.contributor.authorGraham Wileyen_US
dc.contributor.authorIan F Korfen_US
dc.contributor.authorPablo D Rabinowiczen_US
dc.contributor.authorNathan Lakeyen_US
dc.contributor.authorW. Richard McCombieen_US
dc.contributor.authorJeffrey A Jeddelohen_US
dc.contributor.authorRobert A Martienssenen_US
dc.date.accessioned2015-01-23T17:17:23Z
dc.date.accessioned2016-03-30T15:31:22Z
dc.date.available2015-01-23T17:17:23Z
dc.date.available2016-03-30T15:31:22Z
dc.date.issued2005-01-04en_US
dc.identifier.citationBedell JA, Budiman MA, Nunberg A, Citek RW, Robbins D, et al. (2005) Sorghum Genome Sequencing by Methylation Filtration. PLoS Biol 3(1): e13. doi:10.1371/journal.pbio.0030013en_US
dc.identifier.urihttps://hdl.handle.net/11244/14058
dc.descriptionWe would like to thank our collaborators J. McLaren, PhD from Solvigen and J. Osborne, PhD and M. Lenz, PhD from NC+ Hybrids. The sorghum MF sequence set was generated as part of a Department of Energy matching funds grant (DE-fc36–01ID14212) to Orion Genomics and United States Department of Agriculture IFAFS grant 2001–52100-11331 to RAM and WRM. The sorghum whole-genome shotgun sequences were generated as part of a National Science Foundation Experimental Program to Stimulate Competitive Research grant to BAR. Finally, we would like to thank the Free Software/Open Source community for creating wonderful software and for fielding our questions, especially OpenOffice.org, ImageMagick, BioPerl, and the multitude of Linux groups.en_US
dc.descriptionJAB, MAB, AN, RWC, IFK, PDR, NL, WRM, JAJ, and RAM conceived and designed the experiments. JAB, MAB, AN, RWC, JJ, EF, TR, JF, KB, JM, MS, HH, PDR, and JAJ performed the experiments. JAB, AN, RWC, DR, HH, IFK, PDR, JAJ, and RAM analyzed the data. JAB, BAR, GW, IFK, and PDR contributed reagents/materials/analysis tools. JAB, AN, RWC, IFK, PDR, JAJ, and RAM wrote the paper.en_US
dc.description.abstractMethylation filtration makes practical the sequencing of large genomes, such as those found in sorghum, by preferentially capturing functionally relevant sequences.en_US
dc.language.isoen_USen_US
dc.publisherPLos Biologyen_US
dc.relation.ispartofseriesPLoS Biol 3(1):e13en_US
dc.relation.urihttp://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.0030013en_US
dc.rightsAttribution 3.0 United Statesen_US
dc.rights.urihttps://creativecommons.org/licenses/by/3.0/us/en_US
dc.subjectplos biologyen_US
dc.subjectplos biolen_US
dc.subjectplosen_US
dc.subjectpublic library of science biologyen_US
dc.subjectplosbiologyen_US
dc.subjectpublic library of scienceen_US
dc.subjectopen accessen_US
dc.subjectopen-accessen_US
dc.subjectbiology journalen_US
dc.subjectfree biology journalsen_US
dc.subjectscientific journalsen_US
dc.subjectonline science journalen_US
dc.subjectplos journalen_US
dc.subjectbiologyen_US
dc.subjectscienceen_US
dc.subjectscientificen_US
dc.subjectlife scienceen_US
dc.subjectjournalen_US
dc.subjectjournalsen_US
dc.subjectmagazineen_US
dc.subjectbiology articleen_US
dc.subjectbiology articlesen_US
dc.subjectscience articlesen_US
dc.subjectresearchen_US
dc.subjectarticleen_US
dc.subjectarticlesen_US
dc.subjectinfoen_US
dc.subjectbiology newsen_US
dc.subjectrecent biology articlesen_US
dc.subjectbiology news articlesen_US
dc.titleSorghum Genome Sequencing by Methylation Filtrationen_US
dc.typeResearch Articleen_US
dc.description.peerreviewYesen_US
dc.description.peerreviewnoteshttp://www.plosbiology.org/static/editorial#peeren_US
dc.identifier.doi10.1371/journal.pbio.0030013en_US
dc.rights.requestablefalseen_US


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Attribution 3.0 United States
Except where otherwise noted, this item's license is described as Attribution 3.0 United States